morphology Package

A package for handling neuron morphology models

This package provides an object model for representing neuronal morphologies, as well as tools for import/export from files; construction of morphologies within python; traversal of the datastructures; rendering to MayaVI & matplotlib and export to triangular mesh.

Internally, morphforge provides a dual representation for morphologies, either TreeBased: (MorphologyTree) or VertexBased: (MorphologyArray). More information about these can found at XX.

Subpackages