traces Package
traces Package
taggers Module
tracedict Module
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class
TraceDict(data=None)[source] Bases:
object-
Plot(fig=None, ax=None, title='Untitled', xlabel_prefix='Time', ylabel_prefix='', xunits='ms', yunits=None, legend_func=None, figsize=None)[source]
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__getitem__(k)[source]
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__init__(data=None)[source]
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__setitem__(k, v)[source]
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_plot_trace_old(k, v, ax, legend_func, xunits, yunits)[source]
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items()[source]
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iteritems()[source]
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fig_plot_local(x=None, y=None, title=None, xlims=None, ylims=None, xlabel=None, ylabel=None, figsize=None, legend=False, **kwargs)[source]
traceselectorpiecewise Module
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class
DataSelector(minvalue=None, maxvalue=None)[source] Bases:
object-
__init__(minvalue=None, maxvalue=None)[source]
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does_match(level)[source]
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class
LevelSelector(time_selector, data_selector)[source] Bases:
object-
__init__(time_selector, data_selector)[source]
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does_consume()[source]
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does_match(level)[source]
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record_time_in_symbol()[source]
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class
LevelSelectorGroup(S, xunit, yunit)[source] Bases:
object-
__init__(S, xunit, yunit)[source]
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matchall(level_set)[source]
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classmethod
parse_expr(s, xunit, yunit)[source]
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classmethod
parse_term(st, xunit, yunit)[source]
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test_match(level_pieces)[source]
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class
LevelToken(symbol)[source] Bases:
object-
__init__(symbol)[source]
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does_consume()[source]
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does_match(level)[source]
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record_time_in_symbol()[source]
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class
MatchObject[source] Bases:
object-
__getattr__(name)[source]
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__init__()[source]
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__str__()[source]
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set_symbol(symbol, value)[source]
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class
TimeSelector(minduration=None, maxduration=None)[source] Bases:
object-
__init__(minduration=None, maxduration=None)[source]
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does_match(level)[source]
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main()[source]
tracetools Module
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class
NewSpike(time)[source] Bases:
morphforge.traces.eventset.Event-
__init__(time)[source]
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class
Spike(trace, time_indices, firingthres=None)[source] Bases:
object-
__init__(trace, time_indices, firingthres=None)[source]
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add_to_axes(ax)[source]
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duration
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get_peak_size()[source]
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get_peak_time()[source]
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init_get_duration()[source] Calculates the duration of the spike at the 50% line (halfway between spike-max and ‘firingthres’
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init_get_peak()[source]
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peakIndex
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