#!/usr/bin/python
# -*- coding: utf-8 -*-

# ---------------------------------------------------------------------
# Copyright (c) 2012 Michael Hull.
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# modification, are permitted provided that the following conditions
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from morphforge.core import LocMgr, Join
from morphforge.morphology.ui import MatPlotLibViewer
from morphforge.morphology.core import MorphologyTree
from morphforgecontrib.indev.highqualitymesh.create_mesh import MeshFromGTS
from morphforge.morphology.importer.import_array_swc import NewSWCLoader

[docs]def main():
    testSrcsPath = LocMgr().get_test_srcs_path()
    srcSWCFile = Join(testSrcsPath, 'swc_srcs/28o_spindle20aFI.CNG.swc')
    
    srcSWCFile = '/home/michael/Desktop/ply/forPly/aIN 471 nrn + ns 100325.transl.invX.scaled.straightened.swc'
    
    morphs = NewSWCLoader.load_swc_set(src=open(srcSWCFile))
    
    m = morphs[0]
    m = m.to_tree()
    
    mesh = MeshFromGTS.build(m)
    
    # MatPlotLibViewer(m, use_pca=False)

if __name__=='__main__':
    main()