Source code for morphforge.simulation.base.util.celllocator

#!/usr/bin/python
# -*- coding: utf-8 -*-

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# Copyright (c) 2012 Michael Hull.
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import itertools

from morphforge.morphology.util.morphlocator import MorphLocator
from morphforge.simulation.base.core.celllocation import CellLocation
from morphforge.core import SeqUtils


[docs]class CellLocator(object): """Provides the same functionality as MorphLocator, except that it operates on cells.""" @classmethod
[docs] def get_locations_at_distance_away_from_dummy(cls, cell, distance, section_predicate=None): morphology_locations = MorphLocator.get_locations_at_distance_away_from_dummy( morphology=cell.morphology, distance=distance, section_predicate=section_predicate) return [CellLocation(cell=cell, morphlocation=morphology_location) for morphology_location in morphology_locations]
@classmethod
[docs] def get_locations_at_distances_away_from_dummy(cls, cell, distances, section_predicate=None): return list(itertools.chain(*[cls.get_locations_at_distance_away_from_dummy(cell=cell, distance=distance, section_predicate=section_predicate) for distance in distances] ))
@classmethod
[docs] def get_location_at_distance_away_from_dummy(cls, cell, distance, section_predicate=None): """Utility Function""" return SeqUtils.expect_single(cls.get_locations_at_distance_away_from_dummy(cell=cell, distance=distance, section_predicate=section_predicate))