Source code for morphforge.simulation.base.util.celllocator
#!/usr/bin/python
# -*- coding: utf-8 -*-
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# Copyright (c) 2012 Michael Hull.
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import itertools
from morphforge.morphology.util.morphlocator import MorphLocator
from morphforge.simulation.base.core.celllocation import CellLocation
from morphforge.core import SeqUtils
[docs]class CellLocator(object):
"""Provides the same functionality as MorphLocator, except that it operates on cells."""
@classmethod
[docs] def get_locations_at_distance_away_from_dummy(cls, cell, distance, section_predicate=None):
morphology_locations = MorphLocator.get_locations_at_distance_away_from_dummy(
morphology=cell.morphology,
distance=distance,
section_predicate=section_predicate)
return [CellLocation(cell=cell, morphlocation=morphology_location) for morphology_location in morphology_locations]
@classmethod
[docs] def get_locations_at_distances_away_from_dummy(cls, cell, distances, section_predicate=None):
return list(itertools.chain(*[cls.get_locations_at_distance_away_from_dummy(cell=cell, distance=distance, section_predicate=section_predicate) for distance in distances] ))
@classmethod
[docs] def get_location_at_distance_away_from_dummy(cls, cell, distance, section_predicate=None):
"""Utility Function"""
return SeqUtils.expect_single(cls.get_locations_at_distance_away_from_dummy(cell=cell, distance=distance, section_predicate=section_predicate))