Source code for morphforge.morphology.conversion.region_to_int_bimap

#!/usr/bin/python
# -*- coding: utf-8 -*-

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[docs]class RegionToIntMapBiMap(object):
[docs] def __init__(self): self.regionname2int = {} self.int2regionname = {}
[docs] def add_mapping(self, regionname, _int): assert not regionname in self.regionname2int assert not _int in self.int2regionname self.regionname2int[regionname] = _int self.int2regionname[_int] = regionname
[docs] def int_to_region_name(self, _int): return self.int2regionname[_int]
[docs] def region_name_to_int(self, regionname): return self.regionname2int[regionname]
[docs]class AutoRegionToIntMapTable(RegionToIntMapBiMap):
[docs] def __init__(self): RegionToIntMapBiMap.__init__(self) # Add the standard SWC conversions: self.add_mapping(regionname=None, _int=0) from morphforge.morphology import conventions for (name, number) in conventions.SWCRegionCodes.name2number.iteritems(): self.add_mapping(name, number)
[docs] def int_to_region_name(self, _int): if not _int in self.int2regionname: self.add_mapping(regionname='AutoRegion%d' % _int, _int=_int) return RegionToIntMapBiMap.int_to_region_name(self, _int)
[docs] def region_name_to_int(self, regionname): if not regionname in self.regionname2int: self.add_mapping(regionname=regionname, _int=len(self.int2regionname)) return RegionToIntMapBiMap.region_name_to_int(self, regionname)